Open-source ecosystem for in vitro and microphysiological systems
Save the DateDecember 1-2, 2026Charlotte, North Carolina12th Annual Regenerative Manufacturing Innovation Consortium (RegMIC) Meeting: A Roadmap for Tissue Organoids and Body-on-a-Chip Manufacturing Standards
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Tools

Open Tools and Reusable Resources

PhysioVerse maintains practical resources that help contributors, users, curators, developers, and institutions apply shared workflows.

Toolbox

Four tools are available now, with three more in progress

Tool pages collect links, demos, user instructions, analysis workflows, and downloadable outputs. Four tools are currently available, and three machine learning tools are being prepared for launch.

Toward Standardization

Benchmark lung epithelial culture models against a fixed healthy human distal lung tissue reference using PCA centroid distance, Spearman correlation, and robustness summaries.

Ready

Transcriptomics Biomarker Identification

Run GLMQL-MAS biomarker ranking, generate top gene lists, and compare PCA using all genes versus top MAS-selected genes.

Ready

PhysioVerse Data Finder

Search a focused classified study table with titles, DOI links, authors, emails, and main-variable filters for model system, species, tissue, cell type, application, and ECM.

In training / progress

PhysioVerse MPS Engine

Map DOI-level organoid, organ-on-chip, and microphysiological systems data records across model systems, tissues, assays, data modalities, validation, and regulatory features.

In training / progress

Tumor Classification from Histology Imaging

Machine learning models for classifying tumor patterns from histology images are being prepared and evaluated before launch.

In progress · Launching soon

Cilia Video Analysis

Machine learning workflows for analyzing cilia movement and video-based readouts are being prepared for future release.

In progress · Launching soon

Multi-Omic Machine Learning Model

Integrated machine learning workflows for multi-omic data interpretation and model comparison are being prepared and evaluated.

In progress · Launching soon

Standards and manufacturing partners

MOSSDO and RegMIC

Connect with the organizations advancing consensus standards, validation, and regenerative manufacturing across the PhysioVerse ecosystem.